Mission Bay is home to sandy beaches, palm trees, and the famous SeaWorld.

Located just minutes from downtown San Diego, it’s a perfect destination for a secluded, tropical vacation.

In this article, you’ll find some hotels with beach access.

We’ll also reveal the best rooms at each hotel.

Enjoy serene swimming pools, soothing spa treatments, water sports, and activities.

No matter what you prefer, these resorts have it all!

Here are the best Mission Bay hotels in San Diego, California.

1. Paradise Point Resort & Spa

Located on the private island in Mission Bay, this lush resort truly is a paradise of its own.

It offers bungalow-style accommodation surrounded by tropical gardens and lagoons.

Choose the Bayside Junior Suite and have a private terrace with views of Mission Bay.

Although the suite is spacious, there is a lot more at the resort to explore.

You’ll have five swimming pools and numerous spa services to enjoy.

There are several onsite restaurants including the outdoor Tidal serving seasonal food.

The resort also has a marina offering kayaks, jet skis, and other recreational activities.

Adventures and relaxation are a perfect mix for an unforgettable vacation!

  • Guest Rating: 8.3
  • Star Rating: 4 stars
  • Best Rooms: Suites
  • Address: 1404 Vacation Road, Mission Bay, San Diego, CA 92109, United States of America

Check Rooms Official site

2. The Dana on Mission Bay 

Tropical vibes, comfort, and tranquility await you at The Dana on Mission Bay.

Overlooking the private marina, the resort offers a variety of water sports and fun activities.

It also has multiple outdoor pools perfect for a summer refreshment.

You can choose between the family-friendly Tropical Pool or the sparkling Bayside Pool.

The latter is located near Firefly Eatery & Bar serving seasonal dishes with local ingredients.

After a fulfilling day on Mission Bay, relax in your cozy room with a private lanai.

With a view of the tropical garden, you’ll feel nothing but serenity.

  • Guest Rating: 8.2
  • Star Rating: 3 stars
  • Best Rooms: Deluxe king room
  • Address: 1710 W Mission Bay Dr., Mission Bay, San Diego, CA 92109, United States of America

Check Rooms Official site

3. Bahia Resort Hotel

Recharge yourself at the magical Bahia Resort Hotel.

Settled on the peninsula in Mission Bay, the resort has its own private beach.

Enjoy easy access to the beach from your airy Bayfront Room.

The room also has a private terrace with glass doors.

Onsite, the resort features a beautiful outdoor pool and a unique 30-people hot tub.

For dining, head to the Pool Bar & Grill.

If you’re coming with kids, they will love the resort’s tropical playground.

Bahia Resort Hotel is in one of the best locations for the perfect summer holiday.

  • Guest Rating: 8.1
  • Star Rating: 3 stars
  • Best Rooms: Suite with bay view
  • Address: 998 West Mission Bay Drive, Mission Bay, San Diego, CA 92109, United States of America

Check Rooms Official site

4. Hyatt Regency Mission Bay Spa and Marina

Have an adventurous getaway to San Diego at this oceanfront hotel.

You’ll have direct access to whale watching, sailing, and other water activities.

Stay in the beautiful Rooftop Terrace Suite and admire panoramic views from your large, private balcony.

You can also enjoy the view from the Red Marlin Restaurant & Terrace.

Have a delightful breakfast in the morning or an upscale dining experience in the evening.

Take it easy by the outdoor pools surrounded by waterslides, cabanas, and palm trees.

Or for something more relaxing, get pampered at the eco-friendly Blue Marble Spa.

  • Guest Rating: 8.0
  • Star Rating: 4 stars
  • Best Rooms: Suites
  • Address: 1441 Quivira Road, Mission Bay, San Diego, CA 92109, United States of America

Check Rooms Official site

5. San Diego Mission Bay Resort

San Diego Mission Bay Resort provides modern accommodation in beautiful surroundings.

Stay in the stylish King Studio to get a private balcony overlooking the bay.

It’s perfect for a romantic getaway.

Take a dip at the waterfront pool or rent a cabana for an ultimate chill session.

At night, have a locally-inspired meal at the Covewood or a nice cocktail at the intimate Plaza de Sol.

The option of fun bonfires makes this resort great for families too.

There are also spa and fitness facilities.

At this hotel, you can be active or simply relax.

  • Guest Rating: 7.9
  • Star Rating: 4 stars
  • Best Rooms: Studios
  • Address: 1775 East Mission Bay Drive, Mission Bay, San Diego, CA 92109, United States of America

Check Rooms Official site

6. Catamaran Resort Hotel and Spa

This Polynesian-themed hotel is a real tropical hideaway in San Diego.

Take your family to a bird show or engage in water sports.

If you’re on a romantic escape, relax in the soothing hot tub in the pool area.

Or, reward yourself with a special Catamaran Spa treatment.

In the morning, try the romantic Champagne brunch.

You can also satisfy your taste buds at the Oceana Coastal Kitchen serving California cuisine.

Cozy rooms and suites feature private balconies or patios.

You can choose from garden, bayfront, or downtown views.

  • Guest Rating: 7.7
  • Star Rating: 4 stars
  • Best Rooms: Tower building suites
  • Address: 3999 Mission Boulevard, Mission Bay, San Diego, CA 92109, United States of America 

Check Rooms Official site

Mission Bay Hotels Map

If you’re looking for more activities, read this:

Also read:

Find More Hotels in San Diego near Mission Bay


What’s the best Mission Bay hotel with a beach?

Bahia Resort Hotel offers a private beach.

The secluded, sandy beach has lounge chairs and views of the bay.

You can have easy access to the beach from the Bayfront Room.

The room has a private terrace and is perfect for couples.

Bahia Resort Hotel also features an outdoor pool and a hot tub for 30 people.

Also, have a look at La Jolla and Pacific Beach hotels.

What’s the best dog-friendly Mission Bay hotel?

Paradise Point is the best dog-friendly Mission Bay hotel.

The resort allows pets of any size for an additional fee of $150 per stay.

Pets can enjoy a large walking area and restaurant’s patios.

Dana On Mission Bay is also a pet-friendly resort.

Besides the Pet Perks arrival kit, your dog will get a treat at the Firefly Eatery & Bar.

There is an additional fee of $40 for pets.

What’s the best Mission Bay hotel with a kitchen in room?

Catamaran Resort Hotel and Spa offers accommodation with a kitchen.

Tower Building Studio has a kitchenette with full-size appliances.

It also features a private balcony with a view.

It can fit four people so it’s great for families.

Which Mission Bay hotel has the best suites?

Paradise Point Resort & Spa has the most beautiful bungalow-style suites in Mission Bay.

They have a contemporary design and private lanais surrounded by tropical gardens.

A dining room table, a wet bar, and a walk-in closet are also included.

Some Gaslamp Quarter hotels also have luxury suites if you want to explore this area on your San Diego trip.

Which Mission Bay hotel is closest to SeaWorld San Diego?

The Dana on Mission Bay is located 1 mile away from SeaWorld San Diego.

They have a free shuttle to and from SeaWorld for guests.

Hyatt Regency Mission Bay is also very close to SeaWorld San Diego, just 1.1 miles away.

However, they don’t have shuttle services.

You may also be interested in the Best San Diego Hotels with Fun Waterslides & Pools.


Mission Bay HotelsBest Rooms
Paradise Point Resort & SpaSuites
The Dana on Mission BayDeluxe king room
Bahia Resort HotelSuite with bay view
Hyatt Regency Mission Bay Spa and MarinaSuites
San Diego Mission Bay ResortStudios
Catamaran Resort Hotel and SpaTower building suites
For all new cities, I go overboard on my itinerary, just to see every major attraction. Countries I've visited include New Zealand, Singapore, Hong Kong, China, Cambodia, Japan and Thailand. Mostly Asian countries. Next target - Europe!